Projects per year
Personal profile
Research interests
Computational biology, cancer, immuno-oncology, complex systems theory, machine learning
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Dive into the research topics where Ilya Shmulevich is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Prototype System for AML Digital Twins
Thorsson, V. (PI) & Shmulevich, I. (CoPI)
01/1/23 → 12/31/26
Project: Research
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Spatiotemporal Tumor Analytics for Guiding Sequential Targeted-Inhibitor: Immunotherapy Combinations (ST-Analytics)
Heath, J. (PI), Ludwig, C. C. (CoPI), Shmulevich, I. (CoPI), Heath, J. J. R. (CoPI), Wei, W. (CoPI), Fan, R. R. (CoPI) & Thorsson, V. (CoPI)
09/22/22 → 08/31/27
Project: Research
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DOCKET: accelerating knowledge extraction from biomedical data sets
Glusman, G. (PI), Shmulevich, I. (CoPI) & Hadlock, J. (CoPI)
National Center for Advancing Translational Sciences
01/24/20 → 11/30/23
Project: Research
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Integrative miRNA data analysis for clinical cancer genomics
Jones, S. J. (CoPI), Knijnenburg, T. (CoPI) & Shmulevich, I. (CoPI)
09/14/16 → 08/31/21
Project: Research
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Cellular heterogeneity and therapeutic response profiling of human IDH + glioma stem cell cultures
Chambwe, N., Kennedy, S. R., Kohrn, B. F., Lazarchuk, P., Leutert, M., Qin, G., Tercan, B., Sanchez-Contreras, M., Tang, W., Graber, J. J., Paddison, P. J., Villén, J., Shmulevich, I. & Monnat, R. J., Dec 2026, In: Scientific Reports. 16, 1, 3177.Research output: Contribution to journal › Article › peer-review
Open Access -
Predicting Microsatellite Instability from Whole Slide Images Using Texture Features
Swanson, N., Castro, M. A. A., Robertson, A. G., Shmulevich, I. & Tercan, B., 2026, Bioinformatics and Computational Biology - 21st Brazilian Conference, X-Meeting 2025, Proceedings. Dorn, M. & Martins Lopes, F. (eds.). Springer Science and Business Media Deutschland GmbH, p. 62-73 12 p. (Lecture Notes in Computer Science; vol. 16037 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
1 Scopus citations -
Sequential transcriptional waves and NF-κB-driven chromatin remodeling direct drug-induced dedifferentiation in cancer
Su, Y., Liu, C., Lu, X., Chuang, H. Y., Li, G., Shao, S., Kong, Y., Lee, J. W., Ng, R. H., Wong, S., Robert, L., Warden, C., Liu, V., Chen, J., Wang, Z., Qin, G., Tang, Y., Cheng, H., Ng, A. H. C. & Chen, D. & 14 others, , Dec 2026, In: Nature Communications . 17, 1, 3228.Research output: Contribution to journal › Article › peer-review
Open Access -
Classification of non-TCGA cancer samples to TCGA molecular subtypes using compact feature sets
The Cancer Genome Atlas Analysis Network, Feb 10 2025, In: Cancer Cell. 43, 2, p. 195-212.e11Research output: Contribution to journal › Article › peer-review
Open Access33 Scopus citations -
Digital twin models for predicting venetoclax and azacitidine-induced neutropenia in patients with acute myeloid leukemia
Zhang, Y., Martinez, J., Tercan, B., Kuusanmäki, H., Emmert-Streib, F., Chandraseelan, J. G., Farea, A., Yli-Harja, O., Heckman, C. A., Gibbs, D. L., Thorsson, V., Shmulevich, I., Kontro, M., Qin, G. & Aguilar, B., Dec 2025, In: npj Digital Medicine. 8, 1, 596.Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations